PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024981668.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB | ||||||||
Protein Properties | Length: 348aa MW: 39056.7 Da PI: 4.9122 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54 | 3.9e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgrWT+eEd++ +d+++ +G g+W++ ++ g+ R++k+c++rw +yl XP_024981668.1 14 RGRWTAEEDKIMIDYIQTHGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 8*******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 49.9 | 7.2e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ ++eE++ + ++++ lG++ W++Ia++++ gRt++++k++w+++l XP_024981668.1 67 RGNISKEEEDVITKLHASLGNR-WSLIAAHLP-GRTDNEIKNYWNSHL 112 7899******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 348 aa Download sequence |
MGRAPCCEKV GLKRGRWTAE EDKIMIDYIQ THGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRSDLRRGNI SKEEEDVITK LHASLGNRWS LIAAHLPGRT DNEIKNYWNS HLSRKIIPSR 120 RLPVPSMPDL SPHKRKGRTS RSTMKINKTY TSFSNANNKK LMTDPTVVCA NKTTSWDAPP 180 TLISPVNVPI TPLTPCTEKE SIHVYLDPTC SSSYQHSDDG DMMVDDDGMN YFIENGALLL 240 EDVVEEEKIT QDATSNGGKE GKEIESEKGE LVGGNRSSSS TDLLNVGDGK QVVDGEWEWN 300 WNWNFDDEEV GLGLGVGEEE EDIILSWPWQ ESELASTTTD NIAAWLLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47460.1 | 4e-72 | MYB family protein |