PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024981496.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 552aa MW: 61601 Da PI: 7.1445

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024981496.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.8	7.1e-11	263	302	5	44
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 k rr+++NReAAr+sR+RKka++++Le +L++ ++ XP_024981496.1 263 KTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQE 302 7789************************876666665554 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MSFERGEDHH RHHQNHLSPP PQDHQEEAKT PPFLMNIMAT TNKGYSNTST NTFLDPQQHH 60 HHHHHQPYHQ LQFVQHQDHH HDDSNQISFA MINHSMPSSS IRPPTNPTTT TNNNIMRTDG 120 GGPYDLADLD QALFLYGEGQ ASADPSALSS VQDHQRRDSL ELMRAEGSTS SGMRPPTLNI 180 FPSQPMHVVD PSTSTTKATT GLVSPSSSGS RRPSEPSMEN IANPQKDAPP PAPQSSKAIK 240 REGNKKGPTT SSDQGRPKTP DPKTLRRLAQ NREAARKSRL RKKAYVQQLE SSRIKLTQLE 300 QELQRARAQG VYLGGGGGVL GADQGVPLGM NNISSVFDME YARWLEDYHR QMCELQAAVQ 360 EHLPENELRI YVDNCIARID DVMNLKSIVA KSDVFHIISG TWKTPAERCF MWIGGFRPSE 420 LIKIILGQIE PLTEQQLMAI CEVQQATQEA EEALTQGLEA LNQSLSDTIA SDALSSPTNM 480 ANYMGQMAAA MNKLSTLESF VIQADNLRRQ TIHHVLQLLT TRQAARSLLA VAEHFHRLRS 540 LSSLWVARPR QD

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MSFERGEDHH RHHQNHLSPP PQDHQEEAKT PPFLMNIMAT TNKGYSNTST NTFLDPQQHH  60
HHHHHQPYHQ LQFVQHQDHH HDDSNQISFA MINHSMPSSS IRPPTNPTTT TNNNIMRTDG  120
GGPYDLADLD QALFLYGEGQ ASADPSALSS VQDHQRRDSL ELMRAEGSTS SGMRPPTLNI  180
FPSQPMHVVD PSTSTTKATT GLVSPSSSGS RRPSEPSMEN IANPQKDAPP PAPQSSKAIK  240
REGNKKGPTT SSDQGRPKTP DPKTLRRLAQ NREAARKSRL RKKAYVQQLE SSRIKLTQLE  300
QELQRARAQG VYLGGGGGVL GADQGVPLGM NNISSVFDME YARWLEDYHR QMCELQAAVQ  360
EHLPENELRI YVDNCIARID DVMNLKSIVA KSDVFHIISG TWKTPAERCF MWIGGFRPSE  420
LIKIILGQIE PLTEQQLMAI CEVQQATQEA EEALTQGLEA LNQSLSDTIA SDALSSPTNM  480
ANYMGQMAAA MNKLSTLESF VIQADNLRRQ TIHHVLQLLT TRQAARSLLA VAEHFHRLRS  540
LSSLWVARPR QD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06839.3	1e-157	bZIP family protein