PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024981063.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

TALE

Protein Properties

Length: 680aa MW: 74118.1 Da PI: 6.8386

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024981063.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.3	1.5e-09	397	434	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + XP_024981063.1 397 FEHflHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVR 434 554459******************************88 PP
2	BELL	118.6	2.9e-38	259	330	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqe+q+kkakL+++l+eV++rY+qy++q+q+vis Fe++ag+gsak Yt+lAl++iS++FrcLkdai++qi XP_024981063.1 259 ERQEVQMKKAKLVNMLDEVEQRYRQYHNQMQIVISWFEQAAGIGSAKTYTALALQTISKQFRCLKDAIMGQI 330 79********************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 680 aa Download sequence
MATYYNGNSE IQGGDGLQTL VLMNPGYVNY SDSQQPPQQQ SSQPGNFMFL NNHQHTSLSH 60 ASPPTPSQTQ QFVGIPLSAQ PPVSIHPQHD MSALHTFIPR VQYNMYNPVE MAAPPHEVTR 120 FQQGLSLSLS SQQSGFGSQA AGVPTISHTT GDDGRAPGGG GGGGGGSTPS ASGVSNGVSS 180 MQSVLLNSKY LKATQDLLEE VVNVGKGVFK NSDQSSKNLK TVGNGGGGGG GSPPATREGL 240 SGEETSAKHG DGSELTTAER QEVQMKKAKL VNMLDEVEQR YRQYHNQMQI VISWFEQAAG 300 IGSAKTYTAL ALQTISKQFR CLKDAIMGQI KTASRSLGEE DNFSGGKTDG GSRLKFVDNQ 360 IRQQRALQQL GMIQHNAWRP QRGLPERSVS VLRAWLFEHF LHPYPKDSDK HMLAKQTGLT 420 RSQVSNWFIN ARVRLWKPMV EEMYLEEIKE QEQNRSDENK MSKSEQSEEN SSSKQEKSLS 480 PENSKRGFKS NNLENSFIHA DQNNHPPPQM SVSTGVSTSP AATGINFQNP SGFTLIGSSQ 540 MEGITQFSPK KPRNSDRQQT SDVGFTLMSN PTDFMGSLGG YPIGEIGRFS AEQFQAPYSG 600 NGVSLTLGLP HCDNLSMSGS HQNFLPNQNI QLGRGVELDE SNEFEAMNQQ SSSHSAAMYE 660 TMNIQNQKRF AAQPLPDFVA

Sequence ? help Back to Top

Protein Sequence Length: 680 aa Download sequence

MATYYNGNSE IQGGDGLQTL VLMNPGYVNY SDSQQPPQQQ SSQPGNFMFL NNHQHTSLSH  60
ASPPTPSQTQ QFVGIPLSAQ PPVSIHPQHD MSALHTFIPR VQYNMYNPVE MAAPPHEVTR  120
FQQGLSLSLS SQQSGFGSQA AGVPTISHTT GDDGRAPGGG GGGGGGSTPS ASGVSNGVSS  180
MQSVLLNSKY LKATQDLLEE VVNVGKGVFK NSDQSSKNLK TVGNGGGGGG GSPPATREGL  240
SGEETSAKHG DGSELTTAER QEVQMKKAKL VNMLDEVEQR YRQYHNQMQI VISWFEQAAG  300
IGSAKTYTAL ALQTISKQFR CLKDAIMGQI KTASRSLGEE DNFSGGKTDG GSRLKFVDNQ  360
IRQQRALQQL GMIQHNAWRP QRGLPERSVS VLRAWLFEHF LHPYPKDSDK HMLAKQTGLT  420
RSQVSNWFIN ARVRLWKPMV EEMYLEEIKE QEQNRSDENK MSKSEQSEEN SSSKQEKSLS  480
PENSKRGFKS NNLENSFIHA DQNNHPPPQM SVSTGVSTSP AATGINFQNP SGFTLIGSSQ  540
MEGITQFSPK KPRNSDRQQT SDVGFTLMSN PTDFMGSLGG YPIGEIGRFS AEQFQAPYSG  600
NGVSLTLGLP HCDNLSMSGS HQNFLPNQNI QLGRGVELDE SNEFEAMNQQ SSSHSAAMYE  660
TMNIQNQKRF AAQPLPDFVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-150	TALE family protein