PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024978850.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family EIL
Protein Properties Length: 588aa    MW: 64541.2 Da    PI: 5.0657
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024978850.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3461.18.1e-141464122353
                     XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWk 96 
                     el+krmw+d+mll+rlk+++k     k+  ++ +k+++s+e+arrkkmsraQDgiLkYMlk+mevcnaqGfvYgiipe+gkpv gasd+Lr+WWk
  XP_024978850.1  46 ELEKRMWRDKMLLRRLKDENKC----KQG-VDPAKKRQSEEHARRKKMSRAQDGILKYMLKMMEVCNAQGFVYGIIPENGKPVGGASDNLRGWWK 135
                     9***************999986....566.899999*********************************************************** PP

                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT-- CS
            EIN3  97 ekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqg 191
                     ekv+fdrngpaai+k+qa ++ ++++++l   + s++h+l+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWPtG+e+ww     s++ g
  XP_024978850.1 136 EKVRFDRNGPAAIAKHQATHVGSGENEGL--GPVSTPHTLHELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPTGDEEWWL---QSTEKG 225
                     ****************9998888888888..78*****************************************************...9999** PP

                     .-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX......XXXXXXXXXXXXX CS
            EIN3 192 tppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ss......slrkqspkvtlsc 278
                     +ppykkphdlkk+wkv vLtavikhmsp+ie+ir+l+rqsk+lqdkm+akes+++l+++nqee++c+++++   +           +  ++ +++
  XP_024978850.1 226 PPPYKKPHDLKKVWKVNVLTAVIKHMSPEIEKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALCRNIYPTtfPMasggggAGGGDGGSYLIND 320
                     ************************************************************************752255666433348899***** PP

                     XXXXXXX.XXXXXX.XXXXXXXXXX................XXXXXX.XXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS
            EIN3 279 eqkedve.gkkeskikhvqavktta................gfpvvr.krkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353
                      +++dve + +e +  + + +k +                 +f+  + krk+++ +    ++   ++ c+  q+++++++++f+d++++++++
  XP_024978850.1 321 ASDYDVEgVVDEVS-LELEDCKPAPptfvlplagvkgeavdSFNSDNfKRKQPSNDIDDHHQAPDVYACEYPQCPYNDVRVGFHDRSARNNHQ 412
                     *******6333333.456666665589*************94444332555566666667777779*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 588 aa     Download sequence    
MAMFEEMGFS GSFDFLSGPP FETATATEAA AMEEDYSEDD EMEIKELEKR MWRDKMLLRR  60
LKDENKCKQG VDPAKKRQSE EHARRKKMSR AQDGILKYML KMMEVCNAQG FVYGIIPENG  120
KPVGGASDNL RGWWKEKVRF DRNGPAAIAK HQATHVGSGE NEGLGPVSTP HTLHELQDTT  180
LGSLLSALMQ HCDPPQRRFP LEKGVAPPWW PTGDEEWWLQ STEKGPPPYK KPHDLKKVWK  240
VNVLTAVIKH MSPEIEKIRK LVRQSKCLQD KMTAKESATW LAIINQEEAL CRNIYPTTFP  300
MASGGGGAGG GDGGSYLIND ASDYDVEGVV DEVSLELEDC KPAPPTFVLP LAGVKGEAVD  360
SFNSDNFKRK QPSNDIDDHH QAPDVYACEY PQCPYNDVRV GFHDRSARNN HQLNCAYRPI  420
VGGTLNFQTN NLEKLSVFNI PSFGQTKLTA ASLPVNHVAP PPSYGGGGGG GGGGGGGGGG  480
GGGGSISELG LPEDGQRMIS DLMSFYDTNL QQTNKSFNPG NLDQIQIDNG FFGPNVETST  540
GFEFGNCRTP YESAFDSGCN PNVNDNNALD FRFGAQSTFS QDVSMWYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20770.11e-171EIL family protein