PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024978287.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB | ||||||||
Protein Properties | Length: 191aa MW: 22271.3 Da PI: 8.9365 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.5 | 1.3e-17 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd++l+++++ +G g W++ ar g++Rt+k+c++rw++yl XP_024978287.1 16 KGPWTMEEDLILINYIADHGEGVWNSLARSAGLKRTGKSCRLRWLNYL 63 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 57.7 | 2.7e-18 | 69 | 112 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l++++++++G++ W++Ia++++ gRt++++k++w++ XP_024978287.1 69 RGNITPEEQLLIIELHAKWGNR-WSKIAKHLP-GRTDNEIKNYWRT 112 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence |
MEKKPNVCMQ DVQVRKGPWT MEEDLILINY IADHGEGVWN SLARSAGLKR TGKSCRLRWL 60 NYLRPDVRRG NITPEEQLLI IELHAKWGNR WSKIAKHLPG RTDNEIKNYW RTRIQKHVKQ 120 TDNVSGQTSS RRNSQTDMIP SQTCNVASQM EFSYHPPCDN IMNFPGPFAT ETNENVWSMD 180 ELWPLQLLHN V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27810.1 | 5e-81 | MYB family protein |