PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024976888.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | ZF-HD | ||||||||
Protein Properties | Length: 246aa MW: 27425.3 Da PI: 7.9538 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 102.3 | 3.3e-32 | 43 | 97 | 4 | 59 |
ZF-HD_dimer 4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 +rY+eClkNhA+ +GghavDGCgEfm++ g+egt +alkCaAC+CHRnFHR+e e XP_024976888.1 43 YRYRECLKNHAVGIGGHAVDGCGEFMAA-GDEGTLDALKCAACNCHRNFHRKELEG 97 79*************************9.999********************9886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MEFDEHEEQE EEVGIQLPPG NYDAIGNSGR GREVRKSGGG GGYRYRECLK NHAVGIGGHA 60 VDGCGEFMAA GDEGTLDALK CAACNCHRNF HRKELEGQQR HQQQQQQHQY LTATPYYHHH 120 HQRPTGYLHM TPAPSSHHQR PLALPSTSRE DLEEISNPSS SGGGGGGGVG GGSGSRKRFR 180 TKFTQDQKDR MLAFSETLGW RIQKQDEAAV QQFCAETGVK RHVLKVWMHN NKHTIDIMNR 240 SKSKEI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24660.1 | 1e-59 | ZF-HD family protein |