PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024976536.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | NF-YB | ||||||||
Protein Properties | Length: 166aa MW: 17989 Da PI: 6.5164 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 185.6 | 3.6e-58 | 28 | 124 | 2 | 98 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 reqdrflPian+srimkk+lPan+ki+kdak+tvqecvsefisfvtseasdkcq+ekrktingddllwa+atlGfedy++plk+yl++yreleg+ XP_024976536.1 28 REQDRFLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLSRYRELEGD 122 89********************************************************************************************9 PP NF-YB 97 kk 98 +k XP_024976536.1 123 TK 124 75 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence |
MADGPGSPAG GSHESGGEQS PHSNSNIREQ DRFLPIANIS RIMKKALPAN GKIAKDAKDT 60 VQECVSEFIS FVTSEASDKC QKEKRKTING DDLLWAMATL GFEDYIDPLK AYLSRYRELE 120 GDTKGSARGG DGSGKKDTMG PQLVPNAQFP HQGPYTQGMN FLNSHV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37060.1 | 4e-82 | NF-YB family protein |