PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024975985.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB | ||||||||
Protein Properties | Length: 196aa MW: 22817.5 Da PI: 8.7281 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.3 | 2.6e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l d+++++G +W+ +++ g+ R++k+c++rw +yl XP_024975985.1 14 KGAWSEEEDNKLRDYIERYGHWNWRELPKYAGLSRCGKSCRLRWMNYL 61 79******************99************************97 PP | |||||||
2 | Myb_DNA-binding | 55.3 | 1.5e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++++++ ++ +G++ W+tIa+ ++ gR+++++k++w+++l XP_024975985.1 67 RGNFSKEEEDIIIKFHQDMGNK-WSTIAAQLP-GRSDNEIKNHWHTHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
MVRAPCIDKN GMKKGAWSEE EDNKLRDYIE RYGHWNWREL PKYAGLSRCG KSCRLRWMNY 60 LRPSVKRGNF SKEEEDIIIK FHQDMGNKWS TIAAQLPGRS DNEIKNHWHT HLKKRSTKHN 120 HQVIHQVKEE PNSNIQRIIN FAGLPPSFVS TSSDNRVSNE STASRGVSDD STSGSCVQQR 180 LLIDLNQEYV ESWEEC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28110.1 | 1e-58 | MYB family protein |