PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024975811.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | NAC | ||||||||
Protein Properties | Length: 255aa MW: 29758 Da PI: 7.6832 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 142 | 3.4e-44 | 6 | 139 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk...leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 + pGfrF Pt+eel+++yLk+k+eg++ ++++vi+++++y++ PwdLp+ +++++ ++w+fF++r++k+a+g r++r t+sgyWkatg+ XP_024975811.1 6 MVPGFRFYPTEEELITYYLKHKIEGTPslqQDIDRVIPQLHVYDFYPWDLPQyageRCQGDPEQWFFFIPRQEKEARGGRPSRLTSSGYWKATGS 100 579***********************9887777789***************646666666778******************************** PP NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 + v+ ++++++g+k+tLvfy+grap+g+kt+W m+ey+ XP_024975811.1 101 PRIVYFSSNRAIGIKRTLVFYNGRAPNGTKTKWKMNEYK 139 **************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MEGGGMVPGF RFYPTEEELI TYYLKHKIEG TPSLQQDIDR VIPQLHVYDF YPWDLPQYAG 60 ERCQGDPEQW FFFIPRQEKE ARGGRPSRLT SSGYWKATGS PRIVYFSSNR AIGIKRTLVF 120 YNGRAPNGTK TKWKMNEYKA FQQEPSNTNP KPKLIEEFSL CRVYVKSNCL RSFDRRPPGV 180 TINEQVPIPQ PFHNNEHHAT TSTHLNNRSS RPERTSSSDH SYNSSDDQTG NDSHSTMKTD 240 DQLPLWEWEE HQTWF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 8e-73 | NAC family protein |