PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024975606.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 263aa    MW: 29276.6 Da    PI: 5.2808
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024975606.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.26.6e-21107157155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +grW+AeIrdp +   rkr++lg+f+t+eeAa  +++a+ kl+g
  XP_024975606.1 107 KKFRGVRRRP-WGRWAAEIRDPLQ---RKRVWLGTFDTPEEAATVYDEAAVKLKG 157
                     59********.**********844...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MGLKSAVTVQ SVKFSEHVFR TNKFVEEESP PPSPPGDPPT TSFKRRIVRI SVTDPYATDS  60
SGDDDEKVVK RVKKHVSEIK FNPPSSSSFK QDQRKRRDVR STGSVEKKFR GVRRRPWGRW  120
AAEIRDPLQR KRVWLGTFDT PEEAATVYDE AAVKLKGPDA VTNFGKVSSP ESPIVKAETP  180
TVTITGSSSG GEGSANDVVF SPTSVLPSNS ELTPTDYFSY GDVDAFGFDI DLPFDLPEFV  240
VSANFRREEF GEFDIDDFLV DVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-38ERF family protein