PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024975506.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB | ||||||||
Protein Properties | Length: 330aa MW: 37851.4 Da PI: 6.8841 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.5 | 1.1e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd +l+ +++++G+g +W + ++++g++R++k+c++rw++yl XP_024975506.1 14 RGPWSPEEDAKLKSYIEEHGTGgNWIALPHKIGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 37.7 | 4.9e-12 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g++++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_024975506.1 69 GSFSEEEDHIICTLYLSIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 78*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 330 aa Download sequence |
MGRAPCCDKA NVKRGPWSPE EDAKLKSYIE EHGTGGNWIA LPHKIGLKRC GKSCRLRWLN 60 YLRPNIKHGS FSEEEDHIIC TLYLSIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 QRKDQQLSKR SGLNKQEMKR EVLEDFKAPA LCMSMNLYQS YWPTTDFPNL ILTNPDHDNH 180 QEQLHARNQD TITSFDDQYP FDTSSNQPQL FDQNSEKPIS TVYHPQLQNT PYNLLNGDHG 240 LNLFQEFNNY PFGINELVYN STQLEQFDHG LVGGLDNLIT GSNCTSSSAE STPTWGDPLV 300 CPPQMMLTYE DCRHGLLQNC APDQQARRFQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49690.1 | 3e-75 | MYB family protein |