PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024975464.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | NAC | ||||||||
Protein Properties | Length: 189aa MW: 21777.8 Da PI: 10.182 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 136.9 | 1.3e-42 | 10 | 144 | 2 | 127 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 ++GfrF Pt+eel+++yLk+k++ ++ ++++vi+++++y++ PwdLp + ++++e++w+fF++r++k+a+g r++r t+sgyWkatg++ XP_024975464.1 10 ARGFRFYPTEEELISFYLKHKLHCSNtsriQQIQRVIPQLHVYDFYPWDLPrEFCDGDEEQWFFFVPRQEKEARGGRPSRLTSSGYWKATGSSSI 104 68*******************999887776667778***************556667888*********************************** PP NAM 92 vlsk....kgelvglkktLvfykgrapkgektdWvmheyr 127 v+s+ ++ ++g+k+t+vfykgrap+g+kt+W m+ey+ XP_024975464.1 105 VYSSsssiSSGAIGIKRTMVFYKGRAPTGKKTEWKMNEYK 144 **9866666666***************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence |
MDHGEGGVVA RGFRFYPTEE ELISFYLKHK LHCSNTSRIQ QIQRVIPQLH VYDFYPWDLP 60 REFCDGDEEQ WFFFVPRQEK EARGGRPSRL TSSGYWKATG SSSIVYSSSS SISSGAIGIK 120 RTMVFYKGRA PTGKKTEWKM NEYKAFKKEA SSKANSRPKL MQEFSLCRLY IKSKCLRAFD 180 RRPSGVGIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 4e-60 | NAC family protein |