PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_024973293.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 236aa MW: 26948.7 Da PI: 9.69 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 49.6 | 7.2e-16 | 132 | 220 | 1 | 97 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k +++s+v+ +l lp +f++++ k ++ t+tl de+g+++ + ++ + l++GW++F ++gL +gD +vF+ +++ + ++v XP_024973293.1 132 FVKPMLQSHVTGGFWLGLPGHFCRKNLPK--KDGTVTLIDEEGEEFPTVY--LAHKAG--LSGGWRGFSISHGLVDGDALVFQ--QTKPTVFKVY 218 89**********************99544..3449***************..666655..9**********************..4455545666 PP EE CS B3 96 vf 97 ++ XP_024973293.1 219 II 220 65 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 236 aa Download sequence |
MVVSKQNYED LRKQRLEENK RRMEELHLPQ LSQALKTAHS PKPSPMKRTK PRVIGTEMVE 60 VRRSSRVANK PAPVYKEIVV YERVDLPRSS RRYTYSRRDL ANRVYASDEA REYAINKADE 120 LEAMLEGGHP SFVKPMLQSH VTGGFWLGLP GHFCRKNLPK KDGTVTLIDE EGEEFPTVYL 180 AHKAGLSGGW RGFSISHGLV DGDALVFQQT KPTVFKVYII RCKDYQEGEK NDVSDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G19184.1 | 3e-71 | B3 family protein |