PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024972849.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family NAC
Protein Properties Length: 358aa    MW: 40646.4 Da    PI: 8.6351
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024972849.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM175.21.9e-54191451129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeel+++yL +kv + k+++ ++i evd++++ePw+Lp+ +k +ekewyfF+ rdkky+tg r+nrat+ gyWkatgkdke+++ 
  XP_024972849.1  19 LPPGFRFHPTDEELITHYLSNKVVDCKFSA-RAIGEVDMNRIEPWELPRLAKMGEKEWYFFCVRDKKYPTGMRTNRATAGGYWKATGKDKEIFR- 111
                     79**************************99.89***************8888899***************************************. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrle 129
                     ++ lvg+kktLvfykgrapkgekt+Wv+heyrle
  XP_024972849.1 112 RKLLVGMKKTLVFYKGRAPKGEKTNWVVHEYRLE 145
                     999*****************************85 PP

Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MMEDFCISGV VKEDDQMDLP PGFRFHPTDE ELITHYLSNK VVDCKFSARA IGEVDMNRIE  60
PWELPRLAKM GEKEWYFFCV RDKKYPTGMR TNRATAGGYW KATGKDKEIF RRKLLVGMKK  120
TLVFYKGRAP KGEKTNWVVH EYRLEGKSGQ KLSRSTKNEW VICRVFHKNS GGNKVQISGL  180
TRMNSGGNEL LPASLPPLMD SPVAASGGKI SKPTLSEPLH VPCFSNPIDI QKKSMINGYL  240
KTADFTFASN LDHWRIRNLC STGESVHQIK TNFQFPQSST FPANDQALMR GLIENYGQNM  300
KLERDMVTGS QDTGLSTEMN TEISSVMSNL EMGTRRFEEQ ETPLTSIGAI DMDCFWNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.11e-134NAC family protein