PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024972849.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | NAC | ||||||||
Protein Properties | Length: 358aa MW: 40646.4 Da PI: 8.6351 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 175.2 | 1.9e-54 | 19 | 145 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +kv + k+++ ++i evd++++ePw+Lp+ +k +ekewyfF+ rdkky+tg r+nrat+ gyWkatgkdke+++ XP_024972849.1 19 LPPGFRFHPTDEELITHYLSNKVVDCKFSA-RAIGEVDMNRIEPWELPRLAKMGEKEWYFFCVRDKKYPTGMRTNRATAGGYWKATGKDKEIFR- 111 79**************************99.89***************8888899***************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 ++ lvg+kktLvfykgrapkgekt+Wv+heyrle XP_024972849.1 112 RKLLVGMKKTLVFYKGRAPKGEKTNWVVHEYRLE 145 999*****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 358 aa Download sequence |
MMEDFCISGV VKEDDQMDLP PGFRFHPTDE ELITHYLSNK VVDCKFSARA IGEVDMNRIE 60 PWELPRLAKM GEKEWYFFCV RDKKYPTGMR TNRATAGGYW KATGKDKEIF RRKLLVGMKK 120 TLVFYKGRAP KGEKTNWVVH EYRLEGKSGQ KLSRSTKNEW VICRVFHKNS GGNKVQISGL 180 TRMNSGGNEL LPASLPPLMD SPVAASGGKI SKPTLSEPLH VPCFSNPIDI QKKSMINGYL 240 KTADFTFASN LDHWRIRNLC STGESVHQIK TNFQFPQSST FPANDQALMR GLIENYGQNM 300 KLERDMVTGS QDTGLSTEMN TEISSVMSNL EMGTRRFEEQ ETPLTSIGAI DMDCFWNY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61430.1 | 1e-134 | NAC family protein |