PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024972729.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | WRKY | ||||||||
Protein Properties | Length: 243aa MW: 27493.9 Da PI: 9.3086 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.8 | 1.5e-30 | 120 | 179 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ ++++fpr+Y+rC++a +Cpvkkkv+rs ed+++v+ tYegeHnh+ XP_024972729.1 120 VKDGYQWRKYGQKVTRDNPFPRAYFRCSYApTCPVKKKVQRSVEDQTIVVATYEGEHNHP 179 58***************************99****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MIPPMTEHDE EAGDLAEELN RVNMENKKLT QMIKSMNTKY NLLQSRLSDY VTKNPDRSAA 60 GAATATAKRK PETPISGNSE SNSSNEINTC KKPTKDEHNI RPKISRVFVR SEASKTGLVV 120 KDGYQWRKYG QKVTRDNPFP RAYFRCSYAP TCPVKKKVQR SVEDQTIVVA TYEGEHNHPQ 180 PSRHELVSPG LRQTVTAAKP WSTVPTVTLD LTNPLEFDGD NEGSRITERS ELQQFLVGQW 240 HLH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80840.1 | 3e-56 | WRKY family protein |