PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024972055.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB | ||||||||
Protein Properties | Length: 271aa MW: 31015.8 Da PI: 8.1337 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.5 | 2e-15 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W+++Ed++l d++ +G g+W++++ + g+ R +k+c++rw +yl XP_024972055.1 15 KGLWSPDEDQKLRDYILNHGLGCWSAVSTHAGLQRNGKSCRLRWINYL 62 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 46.1 | 1.1e-14 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +T E+e+++ ++ +lG++ W+ +++++ gRt++++k++w++y+ XP_024972055.1 68 RGIFTRHEEEIILTLHGMLGNK-WSQMSQHLP-GRTDNEIKNHWHSYM 113 6789******************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 271 aa Download sequence |
MRSKSSENAK LKHKKGLWSP DEDQKLRDYI LNHGLGCWSA VSTHAGLQRN GKSCRLRWIN 60 YLRPGLKRGI FTRHEEEIIL TLHGMLGNKW SQMSQHLPGR TDNEIKNHWH SYMKKKVENL 120 ENTKSRAVFL DTQKIPSPLN YTRGDSSLES SGHLEGSSTP YSEADGSRKL PKIIFADWLA 180 LDQFRNFDTS YRSLVSRNTY RYSSDLQKSV MNGSGQLNEG SSYGLVDHQD VENDLYDLIC 240 ADKMCQNLSY SDVSLYSCDD LASLTQDFFI C |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48920.1 | 2e-55 | MYB family protein |