PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024971409.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | ERF | ||||||||
Protein Properties | Length: 206aa MW: 23001.6 Da PI: 4.5358 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.9 | 1.2e-18 | 23 | 73 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr ++ +g+Wv+eIr p ++++r++lg++ tae Aa+a++aa ++l+g XP_024971409.1 23 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 73 59*****998.**********9...336*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MVKKEQEIQT ESWKTSSSMI SKKKYKGVRM RSWGSWVSEI RAPNQKTRIW LGSYSTAEAA 60 ARAYDAALLC LKGPTANLNF SHTQYNHDYS TPIMSPKSIQ KIAAAAATVT DTVPSPSYSS 120 SLSSSASTPP PTNPIEDEET LFSANDPLDG TLMSMVAPWY NFDSPTYNDV MLDTSFFEFD 180 HSCSTTMEDV YEEEGGDDIY LWSFCR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21910.1 | 2e-29 | ERF family protein |