PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024970926.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | ERF | ||||||||
Protein Properties | Length: 219aa MW: 24123 Da PI: 8.2082 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.1 | 2.9e-20 | 99 | 149 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp +ng +r++lg++ taeeAa a+++a+ +++g XP_024970926.1 99 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEEAAIAYDRAAYRMRG 149 8********.***********9987..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MMQAEASAFP ATNIGDLPAF CRTASFSSLM PCLSENWGDL PLKVDDSEDM VIYAFLHDAL 60 RTGWTPFNFS AKEIKPESME PSDPQVEETA ANSAPKGKHY RGVRQRPWGK FAAEIRDPAK 120 NGARVWLGTY ETAEEAAIAY DRAAYRMRGS KALLNFPHRI GLNEPEPVRV TSKRRSPEPS 180 TSLSSNSESG SPKRRNTKGS AGEVVEPEVQ SRSSTSINK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17500.1 | 1e-52 | ERF family protein |