PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024970820.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | HSF | ||||||||
Protein Properties | Length: 349aa MW: 38250.6 Da PI: 5.5128 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 117.7 | 7.1e-37 | 29 | 119 | 2 | 101 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y+++ed+++++++sw+e+g++f+v++++efak++LpkyFkh+nf+SFvRQLn+YgF+kv ++ weF+++ F++g+k+ll++ XP_024970820.1 29 FLTKTYQLVEDKSIDDVVSWNEDGSTFIVWNPTEFAKDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFSNDCFRRGEKRLLCD 114 9*****************************************************************99.........****************** PP XXXXX CS HSF_DNA-bind 97 ikrkk 101 i+r+k XP_024970820.1 115 IQRRK 119 ***98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence |
MPPPPPPLER SGLESPAGDT ASRSLPTPFL TKTYQLVEDK SIDDVVSWNE DGSTFIVWNP 60 TEFAKDLLPK YFKHNNFSSF VRQLNTYGFR KVVPDRWEFS NDCFRRGEKR LLCDIQRRKI 120 ASAPPAQAPV PSPAVAAPPL VTLAALPPAT VSPSDSGEEQ VLSSNSSRGA TTNLSRETTA 180 SGGANAELAG ENERLKRENV QLNKELSQMK NLCSNIYVMM SSYATNKPSD GSSSQPPPQQ 240 AATTTVKPLD LLPLKRLAEE YMGNGCRGGG GNHREAAEHE EISPRLFGVP IGVKRSREGG 300 SGEEAEQYNE LQLQQPGVDV KSEPLDHNEN GSSVDNHEST WMMKRSDRN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62020.1 | 5e-88 | HSF family protein |