PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024970744.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | ZF-HD | ||||||||
Protein Properties | Length: 224aa MW: 25498.5 Da PI: 6.9198 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 96.3 | 2.4e-30 | 36 | 91 | 3 | 59 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 ++rY eClkNhA+ +G +avDGC+Efm++ g egt +alkCaAC+CHRnFHR+e+e+ XP_024970744.1 36 GFRYLECLKNHAVGIGKQAVDGCREFMAA-GGEGTLEALKCAACNCHRNFHRKEPEH 91 589*************************9.8899*******************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MEFHRHTEDD DEEEEEDDEE TGIQRTSGRM NGGIAGFRYL ECLKNHAVGI GKQAVDGCRE 60 FMAAGGEGTL EALKCAACNC HRNFHRKEPE HPQASFQHHQ IPPPATYYYH HRPVGYLHVT 120 TPSSSHPHRP PLALPSTSRD NLEEISNPNS EGSKKRFRTK FTESQKERML SFAEGLGWRI 180 QKEEEAAVRQ FCEEIGIKRK VLKVWMHNNK HTLGVTVSLI QGVN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24660.1 | 2e-63 | ZF-HD family protein |