PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024970536.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB | ||||||||
Protein Properties | Length: 267aa MW: 30051.4 Da PI: 7.0999 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.4 | 4.5e-15 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W+++Ed++l d+v +G g+W++++ g+ R +k+c++rw +yl XP_024970536.1 15 KGLWSPDEDQKLRDYVVNYGHGCWSAVPINAGLQRNGKSCRLRWINYL 62 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.6 | 2.2e-16 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E+e + ++ lG++ W++I+++++ gRt++++k++w++yl XP_024970536.1 68 RGAFSSQEEETVLALHGILGNK-WSLISQHLP-GRTDNEIKNHWHSYL 113 89********************.*********.************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 267 aa Download sequence |
MRCKPSEKPK LKHRKGLWSP DEDQKLRDYV VNYGHGCWSA VPINAGLQRN GKSCRLRWIN 60 YLRPGLKRGA FSSQEEETVL ALHGILGNKW SLISQHLPGR TDNEIKNHWH SYLKKQVAKS 120 ENLEAQPKPE YTNGHTESSS SYMNSITRNT SFDSSDLANR SSADAGQPAP PAQINKLPKI 180 LFADWLSLEE FHGHQSSACK DSISNGTSNY QETPVHGLLS NEGSTDSSEA VNCLSDYSNE 240 DMFHTQMKID QIFNFTSGAF NLEDLYM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52260.1 | 2e-64 | MYB family protein |