PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024970303.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 227aa MW: 25794.7 Da PI: 9.5407 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 81.7 | 4.7e-26 | 12 | 61 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +ien rqvtfskRr g++KKA+ELS+LCd+++a+i+fs tgkl+ y+s XP_024970303.1 12 KIENLAARQVTFSKRRRGLFKKAQELSTLCDVDIALIVFSATGKLFQYPS 61 69**********************************************96 PP | |||||||
2 | K-box | 45.6 | 3e-16 | 83 | 173 | 9 | 99 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + ++++++ ++++a L ke+ + e+R+++GedL+ L+l+ L +Le +e++l ++ ++K e +l++i++l+kke +l een L+++l+ XP_024970303.1 83 QPSREMQTESRKSAMLSKELAEKSIELRQMKGEDLQGLDLQGLDKLEAVIESGLVEVVKTKGERMLKEISTLKKKEAQLLEENAFLKRQLA 173 456667777777888888888888***************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MRMVRQKTQI RKIENLAARQ VTFSKRRRGL FKKAQELSTL CDVDIALIVF SATGKLFQYP 60 SSSMNQVLER HRLQSQNVGE LRQPSREMQT ESRKSAMLSK ELAEKSIELR QMKGEDLQGL 120 DLQGLDKLEA VIESGLVEVV KTKGERMLKE ISTLKKKEAQ LLEENAFLKR QLAMMDTSIG 180 QMGIHDQCCD HHSLELTISS LSSRDPPHNY NISSSDTCLK LGQPFSN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 2e-58 | MIKC_MADS family protein |