PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024968649.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | ERF | ||||||||
Protein Properties | Length: 254aa MW: 28399.7 Da PI: 5.6805 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 68.7 | 1.1e-21 | 95 | 145 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr+++ +grW+AeIrdp + kr++lg+++t+eeAa +++a++kl+g XP_024968649.1 95 KKFRGVRRRP-WGRWAAEIRDP-----HrrKRVWLGTYDTPEEAATVYDEAALKLKG 145 59********.**********6.....226*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MEFDRTISIG SAVRFSEHVV TTSKFVHGET PATSIKQRIV RITLTDPYAT DSSGDEEVPV 60 VKRVKKHVSV IDFSTPSSSF AKQEQRKRSA GSMEKKFRGV RRRPWGRWAA EIRDPHRRKR 120 VWLGTYDTPE EAATVYDEAA LKLKGPAAVT NFPRVTVTRT VTVESQSQTA TTTSSSCSEE 180 PLNHTAMSPT SVLYGNPELT AFDHGLGCCD VDSLGFDIDM PFNLPDFVAS ENYCGEELGE 240 FNIDDFLVDF RENY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 101 | 120 | RRRPWGRWAAEIRDPHRRKR |
2 | 117 | 144 | RRKRVWLGTYDTPEEAATVYDEAALKLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 7e-36 | ERF family protein |