PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_024967103.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 211aa MW: 23673.9 Da PI: 7.9822 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 91.4 | 6.9e-29 | 91 | 151 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +Dgy WrKYGqKe+ ++++pr YYrCt++ gC+++k+v+rs++dp+++eitY g+H+++ XP_024967103.1 91 NDGYMWRKYGQKEILNAKYPREYYRCTYRnthGCCATKQVQRSSDDPSIFEITYLGKHTCP 151 7***************************98889**************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 211 aa Download sequence |
MPASSNETEE LSTQNIPNSD DEALSQYAGM DIRRSEYPQP LSGRPHHDDS DTKDSNHKDA 60 SRKKKSSSSS ILKWKQQVKV SLEIGLEVPP NDGYMWRKYG QKEILNAKYP REYYRCTYRN 120 THGCCATKQV QRSSDDPSIF EITYLGKHTC PKISKTNHPS SATESAYGLI DFSSTPEPAA 180 STTKRTSDSS SATQSGSRNS FELSNWPLNH N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G11070.2 | 3e-32 | WRKY family protein |