PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024965383.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 263aa    MW: 29873.6 Da    PI: 5.0398
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024965383.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.12.8e-1596145255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GV+ + ++grW+AeI+dp +   r+r +lg+++t eeAa   ++   kl+g
  XP_024965383.1  96 KFRGVWKR-RWGRWAAEIMDPAT---RQRLWLGTYDTLEEAAMVSDNVVIKLHG 145
                     89***755.5**********954...4****************99999999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MSEKFSDQEE LPFPKLIRIS MIDPYATDSS EDEDDHIFER WRVKKFVNEI NIQPSSKART  60
MPLNGNMTTT RNNPCAGDSK QKAMKNKKSS EDNVRKFRGV WKRRWGRWAA EIMDPATRQR  120
LWLGTYDTLE EAAMVSDNVV IKLHGVGAIT NFVLPTVLEN PPPTNVTSMS DHHPNRKSLK  180
LPLVDAPPLD YQSFDSIQLD DEVASFNMHH DFGSINPKQF GDFGITPIAP DFISETGCGS  240
PSTLKIDNYF EDISDSTLDL WFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.14e-36ERF family protein