PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024965027.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | ERF | ||||||||
Protein Properties | Length: 137aa MW: 15136 Da PI: 8.0332 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50 | 7.6e-16 | 17 | 67 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 +ykG+r + ++g+Wv+eIr+p g + r +lg++ t+e+Aa a + a +l+g+ XP_024965027.1 17 RYKGIRCR-RWGKWVSEIRVP---G-TqDRLWLGTYTTPEGAAMAQDVASYCLRGA 67 8****955.5**********8...3.35*************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 137 aa Download sequence |
MSTSSDEGCS TNQEQKRYKG IRCRRWGKWV SEIRVPGTQD RLWLGTYTTP EGAAMAQDVA 60 SYCLRGAVSL HKLNFPNMLP PTARIDLSPR SVQKAASDAG MAMDARLIAS RETTTVNYDD 120 RSAKEGEGLS ISVDDYL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22810.1 | 2e-47 | ERF family protein |