PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024964373.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | ERF | ||||||||
Protein Properties | Length: 201aa MW: 22797.2 Da PI: 5.7059 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.2 | 7.2e-17 | 46 | 96 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +g+Wv+e+r+p++ + r++lg++ tae+Aa+a++ a ++++g XP_024964373.1 46 PVYRGVRRRN-TGKWVCEVREPNT---KFRVWLGTHPTAEMAARAHDVAVLAMRG 96 68*****887.9******999833...48************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MEDTHSDSKS STAGGDCYVE QEQVMLAEHN PKKRAGRKKF KETRHPVYRG VRRRNTGKWV 60 CEVREPNTKF RVWLGTHPTA EMAARAHDVA VLAMRGRSAC LNFADSVWRL PIPESRNIKD 120 IQKAAAEAAE AFRPREDAAE MEERKELPEI SLYNDEEMMF GLPEFFASMA EGLMVTPPNT 180 LGYGNSMDDX DCGIDXSLWS F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25480.1 | 1e-62 | ERF family protein |