PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024962283.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | ERF | ||||||||
Protein Properties | Length: 202aa MW: 22062.6 Da PI: 7.865 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.4 | 2.1e-19 | 88 | 138 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+++AeIrdp ++g +r++lg++ t+e+Aa a+++a+ k++g XP_024962283.1 88 KFRGVRRRP-WGKYAAEIRDPAKRG--ARVWLGTYETPEDAALAYDQAAYKIRG 138 89*******.**********97765..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MFQQSFMSES DLSFLDSIQH HLLYDSQISD LFPATGSGPS SSGAATLGSV VVSGGGSVVK 60 HEIITEEVEN QELVVGARGN HAPQEFRKFR GVRRRPWGKY AAEIRDPAKR GARVWLGTYE 120 TPEDAALAYD QAAYKIRGSR ALLNFPHLIG TDMAEPVRVT PRRKSVMEAG SPPSSSSEDG 180 AIRIPRKSSS DGTTVDGYYR PY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 2e-44 | ERF family protein |