PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024960360.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bZIP
Protein Properties Length: 163aa    MW: 18375.1 Da    PI: 6.7965
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024960360.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.65.4e-133485556
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56
                    ++ +r+ +NRe+ArrsR RK++ ++ L     +L +eN + ++ ++  ++++
  XP_024960360.1 34 RKRKRMVSNRESARRSRMRKQKHLDDLMIQLSQLRKENNQIISSVSITTQHY 85
                    678999**********************************999888777666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MASSSGTATT SSGGSYPIQN SGSHEDLKRL MDQRKRKRMV SNRESARRSR MRKQKHLDDL  60
MIQLSQLRKE NNQIISSVSI TTQHYMGVEE ENSVXXXXXX XXXXXXXXLN EIIAFRNQPV  120
DFGCGFAEEL YGGGGGGTEF VDEFMSYVYA NQPILASADM IQY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13455RKRKRMVSNRESARRSRMRKQK
24754RRSRMRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.17e-35bZIP family protein