PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024960311.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 277aa    MW: 30252.2 Da    PI: 9.1582
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024960311.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.59e-20136185255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+W+AeIrdp+    + +r++lg+f tae Aa+a+++a+ +++g
  XP_024960311.1 136 NYRGVRQRP-WGKWAAEIRDPR----KaARVWLGTFETAEAAARAYDRAAIEFRG 185
                     59*******.**********94....36************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MQRMIKEEAT TAGHHQLPLI RHPPWRRLTN DEEATVMVNA LKNVMMGGSG STSVNHQNGY  60
DLRLLPPTEY TTVNGGAAGC SVPVPVSVPE TCAICRIKGC LGCNYFKDDM NLNGFGGGGG  120
GGGVGAGGPI KKKKKNYRGV RQRPWGKWAA EIRDPRKAAR VWLGTFETAE AAARAYDRAA  180
IEFRGPRAKL NFLFSDYTTS SLPEHNQQQA APPISRKKPE GNTSRKFELA GEKGKKPITE  240
NEFLDATGEE EIQEWMMIMD FNGNSSDSTL SGTVYSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.13e-28ERF family protein