PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024959998.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | ERF | ||||||||
Protein Properties | Length: 220aa MW: 23792.7 Da PI: 5.3004 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.3 | 1.1e-19 | 28 | 77 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ++GVr ++ +g++vAeIrdp + ++r++lg+f++ae+Aa+a++aa+++l+g+ XP_024959998.1 28 FRGVRKRP-WGKYVAEIRDPLK---KARVWLGTFDSAEDAARAYDAAARNLRGA 77 8*******.**********743...5*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MRGGKAAPAS QAALPVTVGP GSGTEIRFRG VRKRPWGKYV AEIRDPLKKA RVWLGTFDSA 60 EDAARAYDAA ARNLRGAKAK TNFALTIGST AQNQQNPNGH HPFFDGDTEH QIIIPQMPTC 120 SSLSSTVESF SGPRPLMKAD VVLPPVQNRQ THPVVVDTCC DYCDSSSSVV VDEESDAGDI 180 VSSSFQKTLL PFDLNMPPPL DEVTIEASID DDLHCTELRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20310.1 | 6e-38 | ERF family protein |