PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024959076.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB | ||||||||
Protein Properties | Length: 265aa MW: 30205.4 Da PI: 6.9122 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47 | 6e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed +l d++k++G g W+ + + g+ R++k+c++rw++yl XP_024959076.1 14 KGAWTASEDRILSDYIKLHGEGKWRQLPIKAGLQRCGKSCRLRWLNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.8 | 3.9e-16 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ + eE++l+++++k+lG++ W++Ia++++ gRt++++k++w++ XP_024959076.1 67 RGNISCEEEDLIIRLHKLLGNR-WSLIAKRLP-GRTDNEIKNYWNST 111 677788****************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 265 aa Download sequence |
MGKSPCCSKI GLNKGAWTAS EDRILSDYIK LHGEGKWRQL PIKAGLQRCG KSCRLRWLNY 60 LKPDIKRGNI SCEEEDLIIR LHKLLGNRWS LIAKRLPGRT DNEIKNYWNS TLAKKVCELH 120 NDSYVNNRKD KECVNETDLT HTKVVRPKAV RCSRTYFSPH PPPTTTNVDE IEDPANPKSI 180 DQLSLIYHED NDNPSCFNLH DIDVAMGEGC LLSDLFNIDF TNDQMVKRDY MVSGPSTMDA 240 THVSSKEILD FASIPEIEGE WLSLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22640.1 | 1e-59 | MYB family protein |