PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU30001.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

ARR-B

Protein Properties

Length: 670aa MW: 74333.2 Da PI: 6.2102

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU30001.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	91.7	6.1e-29	214	267	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv+av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl PHU30001.1 214 KPRVVWSVELHQQFVQAVHQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 267 79*****************.******************************8 PP
2	Myb_DNA-binding	44.8	2.8e-14	216	266	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v+av+qlG + +k+I + m+ g+t++++ s++qky+ PHU30001.1 216 RVVWSVELHQQFVQAVHQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 266 678***********************************************7 PP
3	Response_reg	81.9	2e-27	34	142	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+p+ +++l+++l+k +y ev+ + +e al l+e++ +D+++ D+ mp+mdG++ll++i e +lp+i+++a ++++ + + + Ga PHU30001.1 34 VLVVDDDPTCLRILEKMLRKCHY-EVTKCNRAEIALSFLRENKngFDIVISDVHMPDMDGFKLLEHIGLEM-DLPVIMMSADDSKDVVMKGVTHGAY 128 89*******************.***********999999******************6654.8******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ +e+l + PHU30001.1 129 DYLIKPVRIEALKN 142 ********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 670 aa Download sequence
MNIGSGSLVT VPSSTGSWKS GDVVSDQFPV GLRVLVVDDD PTCLRILEKM LRKCHYEVTK 60 CNRAEIALSF LRENKNGFDI VISDVHMPDM DGFKLLEHIG LEMDLPVIMM SADDSKDVVM 120 KGVTHGAYDY LIKPVRIEAL KNIWQHVVRK RKYEWKDNNF DQSGSVEEGD RQQKPSEDVD 180 YSSSANEGNW KNSKKRKEEE EEVEDRDDTS NLKKPRVVWS VELHQQFVQA VHQLGIDKAV 240 PKKILELMNV PGLTRENVAS HLQKYRLYLR RLSGVSQHQN GLNNSFMGRP DATFCTISSL 300 NGLDLQALAA AGQIPAQNLA TLQAAALGKS ATKSAISMPL DQRNFFSFEN SKLRFPEGQQ 360 QLNNSNKQID LLHGIPTTME SKQLANLHHP SQSFVGMNMQ VNSTSQHNNS VLMRLSQSQP 420 RTQLLNGANN GSQVSRLPLS MQQSLSPVLT QSGIVDNARG SVYNPVSQAS SMVDFSVNQS 480 KELQSYNFSL GSNSLGMSSL TNRGMLQEEV NSDIKGSRGF PSNYDIFNEL QPKSQNWGLQ 540 NDGSTFDTSL HPCMQGTQDV SSQLLLQQGI SSTHNSGQNR NAPIEKPMYS NGDEIGHSNT 600 MCGSQLNSGG GNMLAVKAER FPDADYQNTN IREQFGRDDL MSAFLRQQAS VGPVETEFGF 660 DGYTLDNLPV

Sequence ? help Back to Top

Protein Sequence Length: 670 aa Download sequence

MNIGSGSLVT VPSSTGSWKS GDVVSDQFPV GLRVLVVDDD PTCLRILEKM LRKCHYEVTK  60
CNRAEIALSF LRENKNGFDI VISDVHMPDM DGFKLLEHIG LEMDLPVIMM SADDSKDVVM  120
KGVTHGAYDY LIKPVRIEAL KNIWQHVVRK RKYEWKDNNF DQSGSVEEGD RQQKPSEDVD  180
YSSSANEGNW KNSKKRKEEE EEVEDRDDTS NLKKPRVVWS VELHQQFVQA VHQLGIDKAV  240
PKKILELMNV PGLTRENVAS HLQKYRLYLR RLSGVSQHQN GLNNSFMGRP DATFCTISSL  300
NGLDLQALAA AGQIPAQNLA TLQAAALGKS ATKSAISMPL DQRNFFSFEN SKLRFPEGQQ  360
QLNNSNKQID LLHGIPTTME SKQLANLHHP SQSFVGMNMQ VNSTSQHNNS VLMRLSQSQP  420
RTQLLNGANN GSQVSRLPLS MQQSLSPVLT QSGIVDNARG SVYNPVSQAS SMVDFSVNQS  480
KELQSYNFSL GSNSLGMSSL TNRGMLQEEV NSDIKGSRGF PSNYDIFNEL QPKSQNWGLQ  540
NDGSTFDTSL HPCMQGTQDV SSQLLLQQGI SSTHNSGQNR NAPIEKPMYS NGDEIGHSNT  600
MCGSQLNSGG GNMLAVKAER FPDADYQNTN IREQFGRDDL MSAFLRQQAS VGPVETEFGF  660
DGYTLDNLPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.2	1e-159	ARR-B family protein