PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU29596.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 134aa MW: 15896.2 Da PI: 10.2362 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.9 | 1.7e-20 | 67 | 115 | 1 | 53 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 ++y+GVr++k +grWvAeIrd ++ ++r++lg+f+taeeA a+++a+ ++ PHU29596.1 67 KKYRGVRQRK-WGRWVAEIRDKRN---NTRYWLGTFDTAEEAVVAYDEAAIEI 115 59*******9.**********533...4**********************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 134 aa Download sequence |
MPHVVRIYMT DNDATDSSTD EEEMLQGEKS QRPKKLWIKE IMIENGRTRV ISKKKSKEKK 60 LLQENMKKYR GVRQRKWGRW VAEIRDKRNN TRYWLGTFDT AEEAVVAYDE AAIEINDANS 120 LKNILEPLLK KINR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 2e-20 | ERF family protein |