PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU29564.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 201aa MW: 22831.4 Da PI: 6.0289 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.3 | 1.4e-16 | 106 | 156 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr++ +g ++AeIr p k +r +lg++ t+e+Aa a+++a+ k++g PHU29564.1 106 RYRGVRRRQ-WGTFAAEIRNP---DrKGARLWLGTYETPEDAALAYDQAAYKIRG 156 7*****887.**********8...3245*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MYQQTTTTIS DSDLSILENI KFHLVNDSDF SQILSMFDPL ISNVDTINSP NSSFGSSQSA 60 VEMSWGDMVT NIDSTWEQVD KLEHEEVAKE EPIVARGVHA PVDWNRYRGV RRRQWGTFAA 120 EIRNPDRKGA RLWLGTYETP EDAALAYDQA AYKIRGSKAR LNFPHLIGSD VYEPVRVTPR 180 KRCHSSESSS IENAPLQKRK L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 2e-41 | ERF family protein |