PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU29563.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

AP2

Protein Properties

Length: 272aa MW: 30669.9 Da PI: 8.3986

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU29563.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	59.2	9.9e-19	108	157	2	54
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 +y+GVr+++ +g+++AeIrdp + k++r +lg++ t+e+Aa a+++a+ k++ PHU29563.1 108 RYRGVRRRP-WGKFAAEIRDPDK--KNARLWLGTYETPEDAALAYDQAAFKIR 157 8******.******844..45*********************987 PP
2	AP2	60.7	3.4e-19	179	229	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp + k++r +lg++ t+e+Aa a+++a+ k++g PHU29563.1 179 RYRGVRRRP-WGKFAAEIRDPDK--KNARLWLGTYETPEDAALAYDQAAFKIRG 229 8******.******844..45***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MNPNDFSLLQ SIQHHLLNDS DIPDIFSTID SNNSPRSSFS NSPSTTENNF YYGEFTPLIN 60 PSTTENNFYY GELTPLINPC STTTLGPTEN PEETAAASVS HAPQDWKRYR GVRRRPWGKF 120 AAEIRDPDKK NARLWLGTYE TPEDAALAYD QAAFKIRPTE NPEETAAASV SHAPQDWKRY 180 RGVRRRPWGK FAAEIRDPDK KNARLWLGTY ETPEDAALAY DQAAFKIRGS KARLNFPHLV 240 GSGVPEPARV NPRRRSHSPE SSSDNGTPKK LF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44840.1	2e-39	ERF family protein