PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU29553.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 213aa MW: 24412.1 Da PI: 9.3841 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.4 | 3.6e-18 | 68 | 118 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +ykGVr+++ +g+++AeIrdp r +r +lg++ t+e+Aa a+++ + +l+g PHU29553.1 68 RYKGVRRRP-WGKYAAEIRDPHR---RgARLWLGTYETPEDAALAYDRTAYRLRG 118 8********.**********743...24*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MQYLFNDPDF SQILSEIQSP RQYSSIPDHQ NGIFQQNIHQ ENQDSVPISQ ETTKNVTEPT 60 LLDDRPKRYK GVRRRPWGKY AAEIRDPHRR GARLWLGTYE TPEDAALAYD RTAYRLRGTS 120 ALLNFPHLIE SNVTEINRVR PRRRPRTPEI CSRCSSPPPS IGDNNQSNNN NTDGPSSKRR 180 NVALINSLAT ANNLDSQSII MERCLTSNNY LFA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 140 | 146 | RPRRRPR |
2 | 141 | 147 | PRRRPRT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 4e-33 | ERF family protein |