PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU28692.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB_related | ||||||||
Protein Properties | Length: 240aa MW: 27618.6 Da PI: 4.1833 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 29.2 | 2.1e-09 | 7 | 31 | 23 | 48 |
-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48 +W++I+++++ gRt++++k++w+++l PHU28692.1 7 RWSLISEHLP-GRTDNEIKNYWNSHL 31 5*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
LKCLFCRWSL ISEHLPGRTD NEIKNYWNSH LSRKVESLRI PSDEKLPQAV VELAKKGKQK 60 QFIKQRCKRK TNASVLNSTS ETAVPITPRL NIEKETPNTI GNGDNNAMEL DRNDHQMLWH 120 DDIVLMDDKD AEIDEDFIFN CLWNDEGENL ELVEKNNNNN NEIFGEDSYG TLNCWDWEYL 180 GEILNNETLA STQEAGQENN GMSSVSIFDM NDNMPNCMNE EATVENIDLM QSDLVNWLLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47460.1 | 2e-13 | MYB family protein |