PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU28523.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 343aa    MW: 36495.6 Da    PI: 7.4316
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU28523.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding409.3e-13106150347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ Iar    +Rt+ q+ s+ qky
       PHU28523.1 106 PWTEEEHRMFLLGLQKLGKGDWRGIARNYVITRTPTQVASHAQKY 150
                      8*****************************89************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MTRRCSHCST NGHNSRTCPN RGVKLFGVRL TDGLIRKSAS MGNLTHFGGG GGGGGGSSTG  60
LNGVVHDSPG DTPDHPAVGG AAADGYGSED FVAGSSSSRE RKKGVPWTEE EHRMFLLGLQ  120
KLGKGDWRGI ARNYVITRTP TQVASHAQKY FIRQSNMSRR KRRSSLFDIV ADESGDTPMV  180
SRDFLAEDPQ AEMQSNNPLP PTPVVDEECE SMGSAASANS IDGEHSLPIP ESSQYPHPLV  240
YPAYVAPFFP MPYPCWPGYT AEPAKAETHE VLKPTAVHSK SPINVDELVG MSKLSLGESI  300
GNAKPPSLSL KLVEGSSRQS AFHANPSSGS SGMNSSHSPI HAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.11e-123MYB_related family protein