PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU28516.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 220aa    MW: 25213.5 Da    PI: 5.8649
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU28516.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2582.3e-1854104256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr ++ +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+ +++g+
  PHU28516.1  54 LYHGVRKRS-WGKWVSEIREPRK---KSRIWLGTFATPEMAARAHDVAAIAIKGH 104
                 69****888.**********843...6**********************999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MEQEHQSPIS LNNLNNNKTT SSSALTKRPI TLISSKEETN HKKTKKLDDT KHPLYHGVRK  60
RSWGKWVSEI REPRKKSRIW LGTFATPEMA ARAHDVAAIA IKGHLAMLNF PELAHQFPKP  120
ASKCAKDIQS AAAKAAALDI SPRNCMEQES KGELMEVVPC SPDEERETNE DPFLDLPDLL  180
MDLTQEFDEF CYSNYFEFWP EEDLYLWDYS HGTLLEVPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.14e-29ERF family protein