PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU27941.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 434aa MW: 49089.4 Da PI: 7.3714

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU27941.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.3	2.5e-12	258	304	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h e+Er RR+++N++f Lr+++P+ K++Ka+ L Av YI++L PHU27941.1 258 KNHVEAERLRREKLNHRFYALRSVVPNV-----SKMDKASLLADAVTYINEL 304 589**********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MMQEIISTSS STTSPALLNT LQKRLQYIIH TRQEWWVYAI FWQASKDANG RLIFSWEDGH 60 FRGTKDLAMA EVRITNADNN VGDPEMFYAV SATNCFVSED DLITHTYNSG FYIWLNNYYE 120 SQLYNYDRAK EAHLHGIRTL VCISTPHGVV ELGSSEVIQE NLELIQLNRS LFGLSNKNSP 180 SQTNHQGLSS FNFVPLGSHP IQKVDTNNNP EIYIGNKSSD SGNSDYDNES SAMYNINSPK 240 KRGRKSSSST KTERIMAKNH VEAERLRREK LNHRFYALRS VVPNVSKMDK ASLLADAVTY 300 INELKAKVEE LESSKSECQK PKRNYVDTVM EMYGSRNNIN SSFGWCNSTG AYGIEVEVKI 360 IGVEAMVRVR SPNVSYPCAR LMNVLRELEF QIHHASVATV KDLMIQDVVI GVPRNLTNEE 420 ALKSVILTKL SVIS

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MMQEIISTSS STTSPALLNT LQKRLQYIIH TRQEWWVYAI FWQASKDANG RLIFSWEDGH  60
FRGTKDLAMA EVRITNADNN VGDPEMFYAV SATNCFVSED DLITHTYNSG FYIWLNNYYE  120
SQLYNYDRAK EAHLHGIRTL VCISTPHGVV ELGSSEVIQE NLELIQLNRS LFGLSNKNSP  180
SQTNHQGLSS FNFVPLGSHP IQKVDTNNNP EIYIGNKSSD SGNSDYDNES SAMYNINSPK  240
KRGRKSSSST KTERIMAKNH VEAERLRREK LNHRFYALRS VVPNVSKMDK ASLLADAVTY  300
INELKAKVEE LESSKSECQK PKRNYVDTVM EMYGSRNNIN SSFGWCNSTG AYGIEVEVKI  360
IGVEAMVRVR SPNVSYPCAR LMNVLRELEF QIHHASVATV KDLMIQDVVI GVPRNLTNEE  420
ALKSVILTKL SVIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	5e-65	bHLH family protein