PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU27851.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TCP

Protein Properties

Length: 294aa MW: 31549.2 Da PI: 7.7264

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU27851.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	122.4	5.1e-38	55	128	2	74
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.e 74 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tg+++++as+ PHU27851.1 55 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGNGTIPASALaA 128 789***************************************************************99977641 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MDPKDSKQPQ QEISNLSSHP ETNNINTSSN MNPAEIKDFQ IGIAEKDEAK KQQLAPKRSS 60 NKDRHTKVEG RGRRIRMPAL CAARIFQLTR ELGHKSDGET IQWLLQQAEP SIIAATGNGT 120 IPASALAAAG PCVSQQGISV SVGLQQKMGE LGASISSGSS SRTIWPMVGG NFGRPHLATT 180 GIWPPSAPDV TTFGHNLGTE SSNCLQKISF PGFDVPSTNL NPMSFTSMLG ATNPQQLPGL 240 ELGLSQEGPI GVMNSQSLNQ FYQQMGHSRM HHHSQPQNQH QQPSPEDGSQ GSGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	2e-68	TCP family protein