PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU27341.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | GRAS | ||||||||
Protein Properties | Length: 528aa MW: 60038.9 Da PI: 6.23 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 343.3 | 4.2e-105 | 147 | 527 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101 + Lle A+a+++++ +++q+l++ l+el+sp+gd+ q+la+yf++AL +r+++s++++y++l + ++++ + +++ + + f+evsP+ +f+h++ N a PHU27341.1 147 DILLETARAIADKNSTRVQQLMWMLNELSSPYGDTEQKLASYFLQALFSRMTDSGERCYRTLLSASDKTCSFESTRKLVLKFQEVSPWTTFGHVASNGA 245 689**********************************************************97777775554444455555****************** PP GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg......skeeleetgerLakfAeelgvpfefnvlvak.rledlelee 193 I+ea+ege+++HiiD++ ++++QWp+Ll+aLa+R++++p+lR+T+v+s++s ++ ++e+g+r++kfA+ +gvpf+fnv+++ +l++l++ + PHU27341.1 246 IMEALEGESKLHIIDISNTYCTQWPTLLEALATRTDETPHLRLTTVVSASSAtggassVQKVMKEIGSRMEKFARLMGVPFKFNVIHHMgNLSELDIGA 344 ************************************************98889999988999***********************96656********* PP GRAS 194 LrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse....sFlerflealeyysalfdsleaklpreseerikvEre 288 L++k++Eala+n++ +lh++ + ++rd +++l+++l+P++v++ve+ead++ + +F+++f e+l++ + f+sl+++++++s+er ++Er+ PHU27341.1 345 LDIKEDEALAINCIGALHSVT----PAGNRRDYLISLFRRLQPRIVTIVEEEADLDVGvdgfDFVKGFQECLKWIRVYFESLDESFSKTSNERLMLERQ 439 ********************8....778889*********************99865556669************************************ PP GRAS 289 llgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve....eesgslvlgWkdrpLvsvSaWr 374 gr+iv+++ac +e+ er+et kW++r++ GF +v++s+++ +++++llr++k +g+++ + + ++l Wk++p+v++SaW+ PHU27341.1 440 -AGRSIVDLLACPPSESMERRETGVKWSNRMHGGGFITVSYSDEVCDDVRALLRRYK-EGWSMGqcggGDAAGIFLSWKEQPVVWASAWK 527 .********************************************************.88888844445588889**************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 528 aa Download sequence |
MDTLFRLVTL QQQQQQQQIQ QQQSDQYSFN SSRTSSSSRS SNKQNTYNIY NYHPHHQDHQ 60 DEECFNFFMD EDDFSSSSSK HTNYPSHHYT HYQQQQQQIS NTPTPTTTSS TPTQQSHHHH 120 HYDHQFSPAR DLNLEFASSF SGKWATDILL ETARAIADKN STRVQQLMWM LNELSSPYGD 180 TEQKLASYFL QALFSRMTDS GERCYRTLLS ASDKTCSFES TRKLVLKFQE VSPWTTFGHV 240 ASNGAIMEAL EGESKLHIID ISNTYCTQWP TLLEALATRT DETPHLRLTT VVSASSATGG 300 ASSVQKVMKE IGSRMEKFAR LMGVPFKFNV IHHMGNLSEL DIGALDIKED EALAINCIGA 360 LHSVTPAGNR RDYLISLFRR LQPRIVTIVE EEADLDVGVD GFDFVKGFQE CLKWIRVYFE 420 SLDESFSKTS NERLMLERQA GRSIVDLLAC PPSESMERRE TGVKWSNRMH GGGFITVSYS 480 DEVCDDVRAL LRRYKEGWSM GQCGGGDAAG IFLSWKEQPV VWASAWKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37650.1 | 0.0 | GRAS family protein |