PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU26222.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Dof

Protein Properties

Length: 374aa MW: 40753.2 Da PI: 8.2247

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU26222.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.7	5.9e-39	52	110	4	62
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +lkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+ + PHU26222.1 52 PHLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRIK 110 5789****************************************************875 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MALIPSSTTN EIWPQIDEKN NLMMASNGSS SSNTRDMEKP IPDPSQQQPP PPHLKCPRCD 60 SSNTKFCYYN NYSLSQPRHF CKACKRYWTR GGTLRNVPVG GGCRKNKRIK RPSTNSSSSS 120 SCTAHDIITT STPNISTLNP SHHVAHNSID ISSTNSINPL FYGLTSERSD LNIPFARLFN 180 SRVSSHATVG EGQVYSLTDS IPGLMDRRMG LGFSNSSVGG VNIMGENNNY GHGGFNPIKQ 240 IQDVVMTSNC TTSSTSLLST YPNMFGSSTS TSTMASLIAS SLQQQKFMSN INGNNFHNLA 300 PNYEELQMSR GDNNNSNVHE GGGNGITMLK AEKMDLSNHQ IHEQIINSSD PSLSWNGAWL 360 DPSNMGSNSV PSLI

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MALIPSSTTN EIWPQIDEKN NLMMASNGSS SSNTRDMEKP IPDPSQQQPP PPHLKCPRCD  60
SSNTKFCYYN NYSLSQPRHF CKACKRYWTR GGTLRNVPVG GGCRKNKRIK RPSTNSSSSS  120
SCTAHDIITT STPNISTLNP SHHVAHNSID ISSTNSINPL FYGLTSERSD LNIPFARLFN  180
SRVSSHATVG EGQVYSLTDS IPGLMDRRMG LGFSNSSVGG VNIMGENNNY GHGGFNPIKQ  240
IQDVVMTSNC TTSSTSLLST YPNMFGSSTS TSTMASLIAS SLQQQKFMSN INGNNFHNLA  300
PNYEELQMSR GDNNNSNVHE GGGNGITMLK AEKMDLSNHQ IHEQIINSSD PSLSWNGAWL  360
DPSNMGSNSV PSLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28310.2	2e-37	Dof family protein