PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU26209.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 362aa    MW: 40897.8 Da    PI: 6.2414
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU26209.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.27.1e-124431355
         AP2 13 grWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                g++ AeI+d s   +r++++lg+f taeeAa a++ a++k++g
  PHU26209.1  4 GSYIAEIKDSS---QRRYVWLGTFNTAEEAALAYDTAARKKYG 43
                89*******43...36***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MPCGSYIAEI KDSSQRRYVW LGTFNTAEEA ALAYDTAARK KYGQRAKTNF PLTTEEYLQT  60
IKDFLSRVNN KNVSDHSLPY KSNDIGSSSK TGGDELRFRL PNQNPNEFRR FTTITGCSVW  120
MSMVHDKCLL EALMKEGVLL PEPEINSQNV PMDVTIIDAN NHESTNETLN LDLCLALPGS  180
KYLIWKPHTP KTVDCLIHIK GSEELLRKFS SVKVFLLVHI SEVKPKGWQK TKIEKTQKTF  240
VEFDHKGFPG DDALNVSSER DFSKFSPGGD RGNGQDADMD SNSNEIMVDH ESRITSHIGV  300
DNFSDEDLNG SSLNSSGSSH YRAFWDVFRR KDVPMLIEYL RFNWKKHGDS DHLTDDSVGQ  360
GG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.17e-08ERF family protein