PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU25607.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TCP

Protein Properties

Length: 285aa MW: 30473.8 Da PI: 8.7143

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU25607.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	122.6	4.5e-38	44	137	7	89
TCP 7 rhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg...........k 89 + +++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tgt++++as+ +a++ +s+++ s s+ PHU25607.1 44 KRKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALSAAAAVSQQGISVSAglvdvsgeniaG 137 689*************************************************************888666666666622222455444443331 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MDPNQPNFIN TSNNNIIIIK HADDQVKDDE IKKQQQQKQV AVPKRKDRHT KVEGRGRRIR 60 MPALCAARIF QLTRELGHKS DGETIQWLLQ QAEPSIIAAT GTGTIPASAL SAAAAVSQQG 120 ISVSAGLVDV SGENIAGSDS NRGSSNNRRT SWPMICGNLG RPHSASTGIW PAPPPVVTSF 180 GYQSSSAASS SSLGSESSNY YLQKIGFPGF DLPAATNMNP MSFTSILGGS NQQLPGLELG 240 LSQEGHIGVL NSQALNHIYA RMQHPQQDQQ NQQQSPANDS QGSGH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	1e-56	TCP family protein