PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU25150.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | HB-other | ||||||||
Protein Properties | Length: 72aa MW: 8105.32 Da PI: 8.4765 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 28.3 | 3e-09 | 25 | 72 | 3 | 46 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkv 46 k ++t+eq+e+Le++++++++ps +r++L ++ +++ +++kv PHU25150.1 25 KYVSYTAEQVEALERVYAECPKPSSLRRQQLICECpilsNIEPKKIKV 72 56799**************************99999999999999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 72 aa Download sequence |
MAMVAQQYRE SSSGSITKHL DSSGKYVSYT AEQVEALERV YAECPKPSSL RRQQLICECP 60 ILSNIEPKKI KV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60690.1 | 2e-33 | HD-ZIP family protein |