PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU24736.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 290aa    MW: 31980.8 Da    PI: 7.8778
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU24736.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.85.1e-13130174347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + +++G+g+W++I+r +   Rt+ q+ s+ qky
       PHU24736.1 130 PWTEEEHRLFLLGLEKFGKGDWRSISRNFVISRTPTQVASHAQKY 174
                      7*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MSPSDWSREE EKAFENAIAM HWVENCEQQW EKFGLMVPTK TIDELKQHYQ LLVDDVTAIE  60
AGQVPIPNYK GEEASSSSTK EGNLGYSAGS VDRRSNCGYS NGFSGTNHDP IGHGGKGNSR  120
SEQERRKGIP WTEEEHRLFL LGLEKFGKGD WRSISRNFVI SRTPTQVASH AQKYFIRLNS  180
MNRDRRRSSI HDITSINNGD VSTHQAPITG QQVNTNPSNA AALGPSVKHR TQPNMHGMGM  240
YGAPMGHPVA APSSHMASAV GTPVMMPHGH PPYVLPVAYP IPPPPPPMHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49010.18e-83MYB family protein