PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU24709.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family TCP
Protein Properties Length: 316aa    MW: 35687.5 Da    PI: 8.741
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU24709.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP141.47.1e-441132642137
         TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............ssssaseceaesssssasnsss 87 
                 a+kkdrhski T+ g+RdRR+Rls+e+a++fF Lqd+LGfdk+skt+eWLl+++k ai el++               ss++++ce  s + ++s+ ++
  PHU24709.1 113 AAKKDRHSKINTAHGPRDRRMRLSLEIARKFFNLQDMLGFDKASKTVEWLLTKSKSAINELVQKinkencngttsisASSPSESCEVISGVINESATTN 211
                 78**************************************************************99999888877765555566644444433332222 PP

         TCP  88 g...kaaksaakskksqksaasalnlakesrakarararertrekmriknkln 137
                 +      k+++k+ ks++++  +  +akesr++arararert+ k++++nk+n
  PHU24709.1 212 TtnnVVHKQQKKKAKSTRRTIFHPVVAKESRNQARARARERTKIKNSLNNKNN 264
                 2443333333345555555555689999*******************999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MQPSGNYSPN NSSSSSYFNI DIPSPYMQYE PEFVQYFHDL HFSQPPHDQY NLDTSIMVEE  60
DSNKLDKQEE EDHEELVLKS SKNKKDEMSS TTTSTIRRKN NKCVAGAGAG AGAAKKDRHS  120
KINTAHGPRD RRMRLSLEIA RKFFNLQDML GFDKASKTVE WLLTKSKSAI NELVQKINKE  180
NCNGTTSISA SSPSESCEVI SGVINESATT NTTNNVVHKQ QKKKAKSTRR TIFHPVVAKE  240
SRNQARARAR ERTKIKNSLN NKNNIGESMD DDHQSGIQGY NTNNVMNVVD NFNLVDTGNW  300
SPFIFNYHDI NTEISQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.11e-28TCP family protein