PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU24594.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 293aa MW: 33751.5 Da PI: 6.9478 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.5 | 1.5e-18 | 25 | 72 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd llv++++ +G g+W+ a++ g++Rt+k+c++rw++yl PHU24594.1 25 RGPWTIEEDNLLVHYITNHGEGRWNMLAKHAGLKRTGKSCRLRWLNYL 72 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.6 | 4.3e-16 | 78 | 121 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T++E++ +++++ +lG++ W++Ia++++ gRt++++k++w++ PHU24594.1 78 RGNLTPQEQLMILELHSKLGNR-WSKIAHYLP-GRTDNEIKNYWRT 121 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 293 aa Download sequence |
MERDMSFLSK TSSSSSSDDD IELRRGPWTI EEDNLLVHYI TNHGEGRWNM LAKHAGLKRT 60 GKSCRLRWLN YLKPDVKRGN LTPQEQLMIL ELHSKLGNRW SKIAHYLPGR TDNEIKNYWR 120 TRVQKQARNL KIDANSAAFQ EMIRYLWIPR LLQKIQSSSS VMPSIQSPQS TPQDFNIEKN 180 STNTSSSSSC SSSHSSNIYN STNIMSECPK IPPRDIGDSD LNSFVKAHFP VDDNSYDVDN 240 YGQLATGNYY NDVMDYDQMS GDQNKLTGDV LSDSFWSNMD EFFYQKQDMS HCR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68320.1 | 1e-73 | MYB family protein |